Open the .mrc and .mod files in 3dmod:
3dmod basename.mrc basename.mod |
To import the TIF stack to Amira and have it load properly with respect to any models or other MRC files, follow the following steps:
Each TIF file must be mirrored, which can be done in a batch process using Image Magick:
for file in zap*.tif; do convert $file -flip $file; done |